Pharmacist Salary

San Francisco vs San Diego: Pharmacist Salary (2026)

Compare pharmacist salaries between San Francisco, CA and San Diego, CA. All figures are 2026 estimates projected from BLS 2025 data.

San Francisco, CA
$180,657
$86.85/hr
San Diego, CA
$168,152
$80.84/hr

Side-by-Side Comparison

MetricSan Francisco, CASan Diego, CA
Median Salary$180,657$168,152
Hourly Rate$86.85$80.84
Entry Level (P10)$138,061$133,805
25th Percentile$167,571$156,818
75th Percentile$224,148$205,442
Top Earner (P90)$233,415$218,405
Total Employed3,6702,840
Side-by-side bar chart comparing San Francisco ($180,657) and San Diego ($168,152) pharmacist salaries.San FranciscoSan DiegoMedian Salary$180,657$168,152Entry Level (P10)$138,061$133,805Top Earner (P90)$233,415$218,405US Median $143,489

Verdict

San Francisco, CA offers better overall compensation for pharmacists, winning 4 out of 4 metrics compared to San Diego.

The salary gap between San Francisco and San Diego is $12,505 (7.44%). San Francisco's median is +25.90% compared to the US national median of $143,489.

Salary Range Comparison

The full salary range (10th to 90th percentile) in San Francisco spans $95,354,San Diego spans $84,600. San Francisco has a wider pay range, meaning more potential for high earners but also more variation.

San Francisco
P10 (Entry)$138,061
P25$167,571
Median$180,657
P75$224,148
P90 (Top)$233,415
San Diego
P10 (Entry)$133,805
P25$156,818
Median$168,152
P75$205,442
P90 (Top)$218,405

Cost-of-Living Adjusted Comparison

After cost-of-living adjustment, San Francisco ($156,260 effective) pays 3.97% more than San Diego ($150,287 effective).

San Francisco
Nominal: $180,657
CoL Index: 115.613
Adjusted: $156,260
San Diego
Nominal: $168,152
CoL Index: 111.887
Adjusted: $150,287

Cost-of-living adjustment: salary × (100 / CoL index). Index of 100 = national average.

Which City Is Right for You?

Choose San Francisco if…

  • Higher median salary ($180,657/year)
  • Better top-earner potential ($233,415)
  • Larger job market (3,670 employed)
  • Better purchasing power (CoL-adjusted: $156,260)
  • You prefer the California area and lifestyle

Choose San Diego if…

  • You prefer the California area and lifestyle

Historical Salary Growth Comparison

Based on BLS OEWS metropolitan area data, pharmacist salaries in San Francisco grew 15.3% from 2019 to 2025, compared to 16.1% growth in San Diego over the same period.

San Francisco, CA

+15.3%

$153,870 (2019) → $177,410 (2025)

San Diego, CA

+16.1%

$142,190 (2019) → $165,130 (2025)

View Full Salary Data

Frequently Asked Questions

Which city pays pharmacists more: San Francisco or San Diego?

San Francisco has a higher median pharmacist salary at $180,657/year, compared to San Diego at $168,152/year — a difference of $12,505 (7.44%).

What is the hourly rate difference between San Francisco and San Diego?

San Francisco pharmacists earn $86.85/hr while San Diego hygienists earn $80.84/hr (2026 est.).

Should I relocate from San Francisco to San Diego as a pharmacist?

Consider more than just salary when comparing San Francisco and San Diego. Factor in cost of living (CoL-adjusted: San Francisco = $156,260, San Diego = $150,287), job availability (3,670 vs 2,840 employed), commute, and career growth potential.

What do entry-level pharmacists earn in San Francisco vs San Diego?

Entry-level (10th percentile) pharmacists earn $138,061 in San Francisco and $133,805 in San Diego. The San Francisco area offers higher starting salaries.

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Written by Sofia Chen, PharmD

Career Analyst

Sofia Chen has 10 years of experience in community pharmacy. She specializes in medication therapy management.

Clinically reviewed by Liam Patel, PharmDData verified by Amina Al-Sayed, PharmD

Methodology & Data Source

All salary figures are 2026 projections based on BLS OEWS May 2025 data. A 1.83% CAGR (derived from 6-year national BLS trends) was applied to estimate current compensation. Cost-of-living adjustments use BEA Regional Price Parity data. Actual salaries vary by employer, certifications, and experience.

Data Sources & Methodology

Source: BLS, OEWS , released .

Compiled and verified by Sofia Chen, PharmD, a licensed pharmacist with 10+ years of clinical experience. · View source data at BLS.gov